Transcript: lnc-ALKBH7-2:2

Basic information

LNCipedia transcript ID: lnc-ALKBH7-2:2 
LNCipedia gene ID: lnc-ALKBH7-2
Location (hg38): chr19:6396345-6412404
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 644 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000398173.3
Alternative gene names: ENSG00000214347.5; CTB-180A7.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1048.8203 coding 
CPAT coding probability 99.40% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ALKBH7-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALKBH7-2:2
4.0 lnc-ALKBH7-2:2
4.1 lnc-ALKBH7-2:2
5.0 lnc-ALKBH7-2:2
5.1 lnc-TRIP10-11:2
5.2 lnc-ALKBH7-2:2