Transcript: lnc-ALOX12-1:13

Basic information

LNCipedia transcript ID: lnc-ALOX12-1:13 
LNCipedia gene ID: lnc-ALOX12-1
Location (hg38): chr17:6954000-6954380
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 381 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr17_893_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.1326 non-coding 
CPAT coding probability 9.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALOX12-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALOX12-1:13
4.0 lnc-ALOX12-1:13
4.1 lnc-ALOX12-1:13
5.0 lnc-ALOX12-1:13
5.1 lnc-ELP5-24:12
5.2 lnc-ALOX12-1:13