Transcript: lnc-ALX4-19:2

Basic information

LNCipedia transcript ID: lnc-ALX4-19:2 
LNCipedia gene ID: lnc-ALX4-19
Location (hg38): chr11:43932070-43933943
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1874 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000005447.1|ENCT00000077475.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.5634 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALX4-19:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ALX4-19:2
5.0 lnc-ALX4-19:2
5.1 lnc-RAG2-30:3
5.2 lnc-ALX4-19:2