Transcript: lnc-ALX4-19:3

Basic information

LNCipedia transcript ID: lnc-ALX4-19:3 
LNCipedia gene ID: lnc-ALX4-19
Location (hg38): chr11:43927690-43933943
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1030 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000005447.1|MICT00000057594.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -116.0365 non-coding 
CPAT coding probability 11.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALX4-19:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ALX4-19:3
5.0 lnc-ALX4-19:3
5.1 lnc-RAG2-30:1
5.2 lnc-ALX4-19:3