Transcript: lnc-ALX4-20:1

Basic information

LNCipedia transcript ID: lnc-ALX4-20:1 
LNCipedia gene ID: lnc-ALX4-20
Ensembl Gene ID: ENSG00000283375
Ensembl Transcript ID: ENST00000637427
Location (hg38): chr11:43855913-43856404
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 289 bp
Exons: 2
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000637427.1
Alternative gene names: ENSG00000283375.1; RP11-613D13.10; AC087521.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -291.5093 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALX4-20:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ALX4-20:1
5.0 lnc-ALX4-20:1
5.1 lnc-RAG2-26:1
5.2 lnc-ALX4-20:1