Transcript: lnc-AMD1-3:1

Basic information

LNCipedia transcript ID: lnc-AMD1-3:1 
LNCipedia gene ID: lnc-AMD1-3
Location (hg38): chr6:110700562-110700900
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 339 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT114430
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 98.9617 coding 
CPAT coding probability 9.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AMD1-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMD1-3:1
4.0 lnc-AMD1-3:1
4.1 lnc-AMD1-3:1
5.0 lnc-AMD1-3:1
5.1 lnc-SLC16A10-13:1
5.2 lnc-AMD1-3:1