Transcript: lnc-AMELY-2:8

Basic information

LNCipedia transcript ID: lnc-AMELY-2:8 
LNCipedia gene ID: lnc-AMELY-2
Location (hg38): chrY:9374969-9377092
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 765 bp
Exons: 9
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000432892.1; FAM197Y7-202
Alternative gene names: ENSG00000228383.2; FAM197Y7; OTTHUMG00000041532.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 33.7105 non-coding 
CPAT coding probability 99.84% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AMELY-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC006156.2-2:5
4.0 lnc-AC006156.2-2:5
4.1 lnc-AC006156.2-2:5
5.0 lnc-AC006156.2-2:5
5.1 lnc-DAZ1-121:5
5.2 lnc-AMELY-2:8