Transcript: lnc-AMELY-3:4

Basic information

LNCipedia transcript ID: lnc-AMELY-3:4 
LNCipedia gene ID: lnc-AMELY-3
Location (hg38): chrY:9349580-9355182
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 467 bp
Exons: 4
Sources: Refseq - Dec 2014
Alternative transcript names: NR_001553; NR_046300
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.3292 non-coding 
CPAT coding probability 19.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AMELY-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC006156.2-3:3
4.0 lnc-AC006156.2-3:3
4.1 lnc-AC006156.2-3:3
5.0 lnc-AC006156.2-3:3
5.1 lnc-DAZ1-122:3
5.2 lnc-AMELY-3:4