Transcript: lnc-AMFR-2:2

Basic information

LNCipedia transcript ID: lnc-AMFR-2:2 
LNCipedia gene ID: lnc-AMFR-2
RefSeq ID: NR_026889
Location (hg38): chr16:56192617-56194525
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1909 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT142661; NR_026889; NR_026889.1
Alternative gene names: DKFZP434H168


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -65.6416 non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AMFR-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMFR-2:2
4.0 lnc-AMFR-2:2
4.1 lnc-AMFR-2:2
5.0 lnc-AMFR-2:2
5.1 lnc-CFAP20-64:1
5.2 lnc-AMFR-2:2