Transcript: lnc-AMMECR1L-2:1

Basic information

LNCipedia transcript ID: lnc-AMMECR1L-2:1 
LNCipedia gene ID: lnc-AMMECR1L-2
Location (hg38): chr2:127846736-127847084
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 349 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT074204
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.0174 non-coding 
CPAT coding probability 2.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AMMECR1L-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMMECR1L-2:1
4.0 lnc-AMMECR1L-2:1
4.1 lnc-AMMECR1L-2:1
5.0 lnc-AMMECR1L-2:1
5.1 lnc-IWS1-11:1
5.2 lnc-AMMECR1L-2:1