Transcript: lnc-AMN1-2:6

Basic information

LNCipedia transcript ID: lnc-AMN1-2:6 
LNCipedia gene ID: lnc-AMN1-2
Location (hg38): chr12:31744311-31757089
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7025 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000011651.1|MICT00000076425.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 23.4746 non-coding 
CPAT coding probability 1.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AMN1-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AMN1-2:6
5.0 lnc-AMN1-2:6
5.1 lnc-RPAP3-103:4
5.2 lnc-AMN1-2:6