Transcript: lnc-AMPH-11:1

Basic information

LNCipedia transcript ID: lnc-AMPH-11:1 
LNCipedia gene ID: lnc-AMPH-11
Location (hg38): chr7:38726109-38727186
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 496 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT120191
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 537.7826 coding 
CPAT coding probability 0.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AMPH-11:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM183B-2:1
4.0 lnc-FAM183B-2:1
4.1 lnc-FAM183B-2:1
5.0 lnc-FAM183B-2:1
5.1 lnc-SFRP4-16:1
5.2 lnc-AMPH-11:1