Transcript: lnc-AMPH-6:2

Basic information

LNCipedia transcript ID: lnc-AMPH-6:2 
LNCipedia gene ID: lnc-AMPH-6
Location (hg38): chr7:38325330-38341293
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4249 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272908.1|ENCT00000411028.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.9709 non-coding 
CPAT coding probability 28.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AMPH-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AMPH-6:2
5.0 lnc-AMPH-6:2
5.1 lnc-SFRP4-6:1
5.2 lnc-AMPH-6:2