Transcript: lnc-AMY1B-1:13

Basic information

LNCipedia transcript ID: lnc-AMY1B-1:13 
LNCipedia gene ID: lnc-AMY1B-1
Location (hg38): chr1:103418754-103525502
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 511 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224613.2|ENST00000447322.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -63.3609 non-coding 
CPAT coding probability 7.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AMY1B-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AMY1B-1:13
5.0 lnc-AMY1B-1:13
5.1 lnc-EXTL2-25:4
5.2 lnc-AMY1B-1:13