Transcript: lnc-AMZ2-5:4

Basic information

LNCipedia transcript ID: lnc-AMZ2-5:4 
LNCipedia gene ID: lnc-AMZ2-5
Ensembl Gene ID: ENSG00000274712
Ensembl Transcript ID: ENST00000614046
Location (hg38): chr17:68205489-68207493
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2005 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000614046.1
Alternative gene names: ENSG00000274712.1; RP11-147L13.15; AC005332.7; AC005332.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 189.7507 coding 
CPAT coding probability 90.52% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AMZ2-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AMZ2-5:4
4.1 lnc-AMZ2-5:4
5.0 lnc-AMZ2-5:4
5.1 lnc-TANC2-105:1
5.2 lnc-AMZ2-5:4