Transcript: lnc-AMZ2-5:6

Basic information

LNCipedia transcript ID: lnc-AMZ2-5:6 
LNCipedia gene ID: lnc-AMZ2-5
Location (hg38): chr17:68206411-68207401
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 991 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT055520
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.2258 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AMZ2-5:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMZ2-6:1
4.0 lnc-AMZ2-5:6
4.1 lnc-AMZ2-5:6
5.0 lnc-AMZ2-5:6
5.1 lnc-TANC2-105:3
5.2 lnc-AMZ2-5:6