Transcript: lnc-AMZ2-7:3

Basic information

LNCipedia transcript ID: lnc-AMZ2-7:3 
LNCipedia gene ID: lnc-AMZ2-7
Location (hg38): chr17:68199506-68200696
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1191 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1640:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 33.1551 non-coding 
CPAT coding probability 16.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AMZ2-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AMZ2-7:3
4.1 lnc-AMZ2-7:3
5.0 lnc-AMZ2-7:3
5.1 lnc-TANC2-104:3
5.2 lnc-AMZ2-7:3