Transcript: lnc-AMZ2-8:1

Basic information

LNCipedia transcript ID: lnc-AMZ2-8:1 
LNCipedia gene ID: lnc-AMZ2-8
Ensembl Gene ID: ENSG00000267731
Ensembl Transcript ID: ENST00000591222
Location (hg38): chr17:68189884-68192802
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2919 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT055517; ENST00000591222.1
Alternative gene names: ENSG00000267731.1; RP11-147L13.8; AC005332.5; AC005332.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.343 non-coding 
CPAT coding probability 7.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AMZ2-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMZ2-8:1
4.0 lnc-AMZ2-8:1
4.1 lnc-AMZ2-8:1
5.0 lnc-AMZ2-8:1
5.1 lnc-TANC2-103:1
5.2 lnc-AMZ2-8:1