Transcript: lnc-ANAPC7-4:5

Basic information

LNCipedia transcript ID: lnc-ANAPC7-4:5 
LNCipedia gene ID: lnc-ANAPC7-4
Location (hg38): chr12:110279050-110281061
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2012 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000013305.1|FTMT24600005577.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -66.7098 non-coding 
CPAT coding probability 3.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANAPC7-4:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANAPC7-4:5
5.0 lnc-ANAPC7-4:5
5.1 lnc-GPN3-7:5
5.2 lnc-ANAPC7-4:5