Transcript: lnc-ANGEL1-5:1

Basic information

LNCipedia transcript ID: lnc-ANGEL1-5:1 
LNCipedia gene ID: lnc-ANGEL1-5
Ensembl Gene ID: ENSG00000259124
Ensembl Transcript ID: ENST00000554926
Location (hg38): chr14:76495363-76726712
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 632 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000554926; ENST00000554926.1; RP11-187O7.3-001; OTTHUMT00000414485.1; NONHSAT037914
Alternative gene names: ENSG00000259124; RP11-187O7.3; ENSG00000259124.1; OTTHUMG00000171618.1; AC008050.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.968 non-coding 
CPAT coding probability 3.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGEL1-5:1 yes no no no

Available literature

  1. Xia (2014), Long noncoding RNA associated-competing endogenous RNAs in gastric cancer., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANGEL1-4:1
3.1 lnc-ANGEL1-5:1
4.0 lnc-ANGEL1-5:1
4.1 lnc-ANGEL1-5:1
5.0 lnc-ANGEL1-5:1
5.1 lnc-PROX2-32:1
5.2 lnc-ANGEL1-5:1