Transcript: lnc-ANGPT2-13:1

Basic information

LNCipedia transcript ID: lnc-ANGPT2-13:1 
LNCipedia gene ID: lnc-ANGPT2-13
Location (hg38): chr8:5845692-5881188
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 265 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3534_chr8:5703213-5738710_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.6309 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGPT2-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANGPT2-13:1
4.0 lnc-ANGPT2-13:1
4.1 lnc-ANGPT2-13:1
5.0 lnc-ANGPT2-13:1
5.1 lnc-DEFA1B-37:1
5.2 lnc-ANGPT2-13:1