Transcript: lnc-ANGPT2-5:1

Basic information

LNCipedia transcript ID: lnc-ANGPT2-5:1 
LNCipedia gene ID: lnc-ANGPT2-5
Location (hg38): chr8:6001437-6003105
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 233 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014917; NONHSAT124765
Alternative gene names: XLOC_006983; linc-CSMD1-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -329.0612 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGPT2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANGPT2-4:1
3.1 lnc-ANGPT2-5:1
4.0 lnc-ANGPT2-5:1
4.1 lnc-ANGPT2-5:1
5.0 lnc-ANGPT2-5:1
5.1 lnc-DEFA1B-29:1
5.2 lnc-ANGPT2-5:1