Transcript: lnc-ANGPTL1-3:2

Basic information

LNCipedia transcript ID: lnc-ANGPTL1-3:2 
LNCipedia gene ID: lnc-ANGPTL1-3
Location (hg38): chr1:178724306-178726284
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1979 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273062.1|ENST00000608517.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 26.1133 non-coding 
CPAT coding probability 96.09% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANGPTL1-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANGPTL1-3:2
5.0 lnc-ANGPTL1-3:2
5.1 lnc-SH2D1B-167:2
5.2 lnc-ANGPTL1-3:2