Transcript: lnc-ANGPTL2-10:1

Basic information

LNCipedia transcript ID: lnc-ANGPTL2-10:1 
LNCipedia gene ID: lnc-ANGPTL2-10
Location (hg38): chr9:126407774-126410504
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2731 bp
Exons: 1
Sources: long non-coding rna db - lncrnadb.com
Alternative transcript names: NR_045006.1
Alternative gene names: NRON; NCRNA00194


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.6007 non-coding 
CPAT coding probability 8.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGPTL2-10:1 yes no no no

Available literature

  1. Imam (2015), The lncRNA NRON modulates HIV-1 replication in a NFAT-dependent manner and is differentially regulated by early and late viral proteins., Sci Rep
  2. Peng (2015), The Long Noncoding RNA IFNG-AS1 Promotes T Helper Type 1 Cells Response in Patients with Hashimoto's Thyroiditis., Sci Rep
  3. Atianand (2014), Long non-coding RNAs and control of gene expression in the immune system., Trends Mol Med
  4. Willingham (2005), A strategy for probing the function of noncoding RNAs finds a repressor of NFAT., Science


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANGPTL2-3:1
3.1 lnc-ANGPTL2-4:1
4.0 NRON:1
4.1 NRON:1
5.0 NRON:1
5.1 lnc-SPOUT1-87:1
5.2 lnc-ANGPTL2-10:1