Transcript: lnc-ANGPTL2-1:1

Basic information

LNCipedia transcript ID: lnc-ANGPTL2-1:1 
LNCipedia gene ID: lnc-ANGPTL2-1
Location (hg38): chr9:127214035-127221907
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 397 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000453199.1; RP13-225O21.2-001; OTTHUMT00000054146.1; NONHSAT134793
Alternative gene names: ENSG00000228487.1; RP13-225O21.2; OTTHUMG00000020697.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.6055 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGPTL2-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANGPTL2-1:1
4.0 lnc-ANGPTL2-1:1
4.1 lnc-ANGPTL2-1:1
5.0 lnc-ANGPTL2-1:1
5.1 lnc-SPOUT1-72:1
5.2 lnc-ANGPTL2-1:1