Transcript: lnc-ANGPTL2-1:3

Basic information

LNCipedia transcript ID: lnc-ANGPTL2-1:3 
LNCipedia gene ID: lnc-ANGPTL2-1
Ensembl Gene ID: ENSG00000228487
Ensembl Transcript ID: ENST00000631003
Location (hg38): chr9:127213783-127216170
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 318 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000631003.1
Alternative gene names: ENSG00000228487.2; RP13-225O21.2; AL450263.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -168.0161 non-coding 
CPAT coding probability 1.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGPTL2-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ANGPTL2-1:3
4.1 lnc-ANGPTL2-1:3
5.0 lnc-ANGPTL2-1:3
5.1 lnc-SPOUT1-72:3
5.2 lnc-ANGPTL2-1:3