Transcript: lnc-ANGPTL2-2:4

Basic information

LNCipedia transcript ID: lnc-ANGPTL2-2:4 
LNCipedia gene ID: lnc-ANGPTL2-2
Ensembl Gene ID: ENSG00000224842
Ensembl Transcript ID: ENST00000432418
Location (hg38): chr9:126608113-126612519
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 423 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00015883; ENST00000432418.1; RP11-123K19.1-003; OTTHUMT00000054120.1; NONHSAT134776
Alternative gene names: XLOC_007855; linc-MAPKAP1-3; ENSG00000224842.2; RP11-123K19.1; OTTHUMG00000020690.2; AL161908.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.4805 non-coding 
CPAT coding probability 1.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGPTL2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANGPTL2-1:3
3.1 lnc-ANGPTL2-2:4
4.0 lnc-ANGPTL2-2:4
4.1 lnc-ANGPTL2-2:4
5.0 lnc-ANGPTL2-2:4
5.1 lnc-SPOUT1-85:9
5.2 lnc-ANGPTL2-2:4