Transcript: lnc-ANGPTL3-5:1

Basic information

LNCipedia transcript ID: lnc-ANGPTL3-5:1 
LNCipedia gene ID: lnc-ANGPTL3-5
Location (hg38): chr1:62796795-62798246
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 359 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT003643
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.832 non-coding 
CPAT coding probability 4.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGPTL3-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANGPTL3-5:1
4.0 lnc-ANGPTL3-5:1
4.1 lnc-ANGPTL3-5:1
5.0 lnc-ANGPTL3-5:1
5.1 lnc-USP1-8:1
5.2 lnc-ANGPTL3-5:1