Transcript: lnc-ANK2-11:1

Basic information

LNCipedia transcript ID: lnc-ANK2-11:1 
LNCipedia gene ID: lnc-ANK2-11
Location (hg38): chr4:113785041-113788993
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3953 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000069825.1|FTMT21600006090.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -37.3548 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANK2-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANK2-11:1
5.0 lnc-ANK2-11:1
5.1 lnc-LRIT3-45:1
5.2 lnc-ANK2-11:1