Transcript: lnc-ANK2-13:3

Basic information

LNCipedia transcript ID: lnc-ANK2-13:3 
LNCipedia gene ID: lnc-ANK2-13
Location (hg38): chr4:113980231-113986841
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6611 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000069831.1|FTMT21600006100.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.8258 non-coding 
CPAT coding probability 5.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANK2-13:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANK2-13:3
5.0 lnc-ANK2-13:3
5.1 lnc-LRIT3-51:3
5.2 lnc-ANK2-13:3