Transcript: lnc-ANKFY1-1:1

Basic information

LNCipedia transcript ID: lnc-ANKFY1-1:1 
LNCipedia gene ID: lnc-ANKFY1-1
Location (hg38): chr17:4159666-4160638
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 861 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026020; NONHSAT145050
Alternative gene names: XLOC_012360; linc-ZZEF1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 25.8611 non-coding 
CPAT coding probability 2.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKFY1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKFY1-1:1
3.1 lnc-ANKFY1-1:1
4.0 lnc-ANKFY1-1:1
4.1 lnc-ANKFY1-1:1
5.0 lnc-ANKFY1-1:1
5.1 lnc-PHF23-75:1
5.2 lnc-ANKFY1-1:1