Transcript: lnc-ANKMY1-2:7

Basic information

LNCipedia transcript ID: lnc-ANKMY1-2:7 
LNCipedia gene ID: lnc-ANKMY1-2
Ensembl Gene ID: ENSG00000218416
Ensembl Transcript ID: ENST00000471662
Location (hg38): chr2:240449315-240451543
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1540 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT077819; ENST00000471662.1
Alternative gene names: ENSG00000218416.4; PP14571; AC110619.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.6538 non-coding 
CPAT coding probability 93.34% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANKMY1-2:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC110619.2.1-2:3
4.0 lnc-AC110619.2.1-2:3
4.1 lnc-AC110619.2.1-2:3
5.0 lnc-AC110619.2.1-2:3
5.1 lnc-STK25-33:5
5.2 lnc-ANKMY1-2:7