Transcript: lnc-ANKMY1-5:1

Basic information

LNCipedia transcript ID: lnc-ANKMY1-5:1 
LNCipedia gene ID: lnc-ANKMY1-5
Location (hg38): chr2:240378137-240387735
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8552 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000052123.1|MICT00000211116.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.0456 non-coding 
CPAT coding probability 8.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKMY1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC110619.2.1-1:5
5.0 lnc-AC110619.2.1-1:5
5.1 lnc-STK25-34:1
5.2 lnc-ANKMY1-5:1