Transcript: lnc-ANKRD10-1:1

Basic information

LNCipedia transcript ID: lnc-ANKRD10-1:1 
LNCipedia gene ID: lnc-ANKRD10-1
Location (hg38): chr13:110956466-110960082
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 461 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022117; NONHSAT035194
Alternative gene names: XLOC_010724; linc-ANKRD10-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.9628 non-coding 
CPAT coding probability 2.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD10-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD10-1:1
3.1 lnc-ANKRD10-1:1
4.0 lnc-ANKRD10-1:1
4.1 lnc-ANKRD10-1:1
5.0 lnc-ANKRD10-1:1
5.1 lnc-COL4A1-16:2
5.2 lnc-ANKRD10-1:1