Transcript: lnc-ANKRD10-4:1

Basic information

LNCipedia transcript ID: lnc-ANKRD10-4:1 
LNCipedia gene ID: lnc-ANKRD10-4
Location (hg38): chr13:111317117-111319992
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2515 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00022315
Alternative gene names: XLOC_010725; linc-ANKRD10-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.4911 non-coding 
CPAT coding probability 3.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD10-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD10-3:1
3.1 lnc-ANKRD10-4:1
4.0 lnc-ANKRD10-4:1
4.1 lnc-ANKRD10-4:1
5.0 lnc-ANKRD10-4:1
5.1 lnc-COL4A1-20:2
5.2 lnc-ANKRD10-4:1