Transcript: lnc-ANKRD11-1:2

Basic information

LNCipedia transcript ID: lnc-ANKRD11-1:2 
LNCipedia gene ID: lnc-ANKRD11-1
Ensembl Gene ID: ENSG00000261118
Ensembl Transcript ID: ENST00000565310
Location (hg38): chr16:89492403-89493793
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 405 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000565310.1; RP11-104N10.1-002; OTTHUMT00000430341.1; NONHSAT144534
Alternative gene names: ENSG00000261118.1; RP11-104N10.1; OTTHUMG00000175513.2; AC092123.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.7322 non-coding 
CPAT coding probability 4.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD11-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD11-1:2
4.0 lnc-ANKRD11-1:2
4.1 lnc-ANKRD11-1:2
5.0 lnc-ANKRD11-1:2
5.1 lnc-KLHDC4-53:9
5.2 lnc-ANKRD11-1:2