Transcript: lnc-ANKRD11-3:1

Basic information

LNCipedia transcript ID: lnc-ANKRD11-3:1 
LNCipedia gene ID: lnc-ANKRD11-3
Location (hg38): chr16:89517637-89522217
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4148 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000499807; NONHSAT144536
Alternative gene names: ENSG00000245196; AC092123.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.9727 non-coding 
CPAT coding probability 90.38% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANKRD11-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD11-1:1
3.1 lnc-ANKRD11-3:1
4.0 lnc-ANKRD11-3:1
4.1 lnc-ANKRD11-3:1
5.0 lnc-ANKRD11-3:1
5.1 lnc-KLHDC4-54:1
5.2 lnc-ANKRD11-3:1