Transcript: lnc-ANKRD18B-6:12

Basic information

LNCipedia transcript ID: lnc-ANKRD18B-6:12 
LNCipedia gene ID: lnc-ANKRD18B-6
Location (hg38): chr9:33604322-33604647
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 219 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1854:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -43.5886 non-coding 
CPAT coding probability 6.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD18B-6:12 no no no no

Available literature

  1. Abdelmohsen (2013), Senescence-associated lncRNAs: senescence-associated long noncoding RNAs., Aging Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ANKRD18B-6:12
4.1 lnc-ANKRD18B-6:12
5.0 lnc-ANKRD18B-6:12
5.1 lnc-RECK-59:12
5.2 lnc-ANKRD18B-6:12