Transcript: lnc-ANKRD18B-6:6

Basic information

LNCipedia transcript ID: lnc-ANKRD18B-6:6 
LNCipedia gene ID: lnc-ANKRD18B-6
Location (hg38): chr9:33602283-33605190
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 523 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT130768
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.5527 non-coding 
CPAT coding probability 32.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD18B-6:6 no no no no

Available literature

  1. Abdelmohsen (2013), Senescence-associated lncRNAs: senescence-associated long noncoding RNAs., Aging Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL139008.2-1:8
4.0 lnc-ANKRD18B-6:6
4.1 lnc-ANKRD18B-6:6
5.0 lnc-ANKRD18B-6:6
5.1 lnc-RECK-59:6
5.2 lnc-ANKRD18B-6:6