Transcript: lnc-ANKRD18B-6:9

Basic information

LNCipedia transcript ID: lnc-ANKRD18B-6:9 
LNCipedia gene ID: lnc-ANKRD18B-6
Ensembl Gene ID: ENSG00000226562
Ensembl Transcript ID: ENST00000602933
Location (hg38): chr9:33603340-33605293
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 601 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000602933.2
Alternative gene names: ENSG00000226562.3; CYP4F26P


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 30.8932 non-coding 
CPAT coding probability 8.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD18B-6:9 no no no no

Available literature

  1. Abdelmohsen (2013), Senescence-associated lncRNAs: senescence-associated long noncoding RNAs., Aging Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ANKRD18B-6:9
4.1 lnc-ANKRD18B-6:9
5.0 lnc-ANKRD18B-6:9
5.1 lnc-RECK-59:9
5.2 lnc-ANKRD18B-6:9