Transcript: lnc-ANKRD20A2-15:2

Basic information

LNCipedia transcript ID: lnc-ANKRD20A2-15:2 
LNCipedia gene ID: lnc-ANKRD20A2-15
RefSeq ID: NR_126049
Location (hg38): chr9:39873857-39875395
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1424 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126049; NR_126049.1
Alternative gene names: LOC554249


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 102.5879 coding 
CPAT coding probability 13.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANKRD20A2-15:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD20A2-15:2
4.0 lnc-ANKRD20A2-15:2
4.1 lnc-ANKRD20A2-15:2
5.0 lnc-ANKRD20A2-15:2
5.1 lnc-DCAF10-27:2
5.2 lnc-ANKRD20A2-15:2