Transcript: lnc-ANKRD20A2-22:3

Basic information

LNCipedia transcript ID: lnc-ANKRD20A2-22:3 
LNCipedia gene ID: lnc-ANKRD20A2-22
Location (hg38): chr9:40992288-40993475
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 711 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1393:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -30.87 non-coding 
CPAT coding probability 2.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD20A2-22:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-BX255923.1-8:8
4.1 lnc-BX255923.1-8:8
5.0 lnc-BX255923.1-8:8
5.1 lnc-DCAF10-45:3
5.2 lnc-ANKRD20A2-22:3