Transcript: lnc-ANKRD20A3-3:2

Basic information

LNCipedia transcript ID: lnc-ANKRD20A3-3:2 
LNCipedia gene ID: lnc-ANKRD20A3-3
Location (hg38): chr9:66203490-66208833
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1716 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000450911.2
Alternative gene names: ENSG00000236322.2; RP11-327I22.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 141.8243 coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANKRD20A3-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD20A3-3:2
4.0 lnc-ANKRD20A3-3:2
4.1 lnc-ANKRD20A3-3:2
5.0 lnc-ANKRD20A3-3:2
5.1 lnc-ZFAND5-48:2
5.2 lnc-ANKRD20A3-3:2