Transcript: lnc-ANKRD20A4-18:6

Basic information

LNCipedia transcript ID: lnc-ANKRD20A4-18:6 
LNCipedia gene ID: lnc-ANKRD20A4-18
Ensembl Gene ID: ENSG00000170161
Ensembl Transcript ID: ENST00000467494
Location (hg38): chr9:62898106-62898904
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 256 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000467494.2
Alternative gene names: ENSG00000170161.6; RP11-262H14.4; AL512625.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.1721 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD20A4-18:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-262H14.4.1-6:5
4.0 lnc-RP11-262H14.4.1-6:5
4.1 lnc-RP11-262H14.4.1-6:5
5.0 lnc-RP11-262H14.4.1-6:5
5.1 lnc-ZNF658-55:6
5.2 lnc-ANKRD20A4-18:6