Transcript: lnc-ANKRD20A4-5:1

Basic information

LNCipedia transcript ID: lnc-ANKRD20A4-5:1 
LNCipedia gene ID: lnc-ANKRD20A4-5
Location (hg38): chr9:63812989-63819027
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4225 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000366322; NONHSAT131614
Alternative gene names: ENSG00000203508; CR786580.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 51.366 non-coding 
CPAT coding probability 8.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANKRD20A4-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-195B21.3.1-1:1
3.1 lnc-RP11-195B21.3.1-2:1
4.0 lnc-RP11-195B21.3.1-2:1
4.1 lnc-RP11-195B21.3.1-2:1
5.0 lnc-RP11-195B21.3.1-2:1
5.1 lnc-ZNF658-45:1
5.2 lnc-ANKRD20A4-5:1