Transcript: lnc-ANKRD20A4-7:3

Basic information

LNCipedia transcript ID: lnc-ANKRD20A4-7:3 
LNCipedia gene ID: lnc-ANKRD20A4-7
Location (hg38): chr9:63859716-63906739
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8887 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000105464.1|MICT00000359542.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.2429 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD20A4-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-195B21.3.1-7:3
5.0 lnc-RP11-195B21.3.1-7:3
5.1 lnc-ZNF658-43:3
5.2 lnc-ANKRD20A4-7:3