Transcript: lnc-ANKRD20A4-9:1

Basic information

LNCipedia transcript ID: lnc-ANKRD20A4-9:1 
LNCipedia gene ID: lnc-ANKRD20A4-9
Ensembl Gene ID: ENSG00000224267
Ensembl Transcript ID: ENST00000431077
Location (hg38): chr9:63728877-63744910
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 347 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000431077.1; RP11-149F8.5-001; OTTHUMT00000129827.1; NONHSAT131608
Alternative gene names: ENSG00000224267.1; RP11-149F8.5; OTTHUMG00000058671.1; AL772155.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.4804 non-coding 
CPAT coding probability 35.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD20A4-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-195B21.3.1-1:1
4.0 lnc-RP11-195B21.3.1-1:1
4.1 lnc-RP11-195B21.3.1-1:1
5.0 lnc-RP11-195B21.3.1-1:1
5.1 lnc-ZNF658-47:1
5.2 lnc-ANKRD20A4-9:1