Transcript: lnc-ANKRD30A-14:3

Basic information

LNCipedia transcript ID: lnc-ANKRD30A-14:3 
LNCipedia gene ID: lnc-ANKRD30A-14
Location (hg38): chr10:37621363-37632888
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 415 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018711; NONHSAT012784
Alternative gene names: XLOC_008456; linc-ZNF33A-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -48.5423 non-coding 
CPAT coding probability 2.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD30A-14:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF33A-2:3
3.1 lnc-ZNF33A-4:3
4.0 lnc-ZNF33A-4:3
4.1 lnc-ZNF33A-4:3
5.0 lnc-ZNF33A-4:3
5.1 lnc-NPY4R2-130:3
5.2 lnc-ANKRD30A-14:3