Transcript: lnc-ANKRD30B-12:1

Basic information

LNCipedia transcript ID: lnc-ANKRD30B-12:1 
LNCipedia gene ID: lnc-ANKRD30B-12
Location (hg38): chr18:14327423-14332523
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2875 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002ktb_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.0843 non-coding 
CPAT coding probability 7.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD30B-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD30B-12:1
4.0 lnc-ANKRD30B-12:1
4.1 lnc-ANKRD30B-12:1
5.0 lnc-ANKRD30B-12:1
5.1 lnc-RIOK3-101:1
5.2 lnc-ANKRD30B-12:1