Transcript: lnc-ANKRD30B-13:11

Basic information

LNCipedia transcript ID: lnc-ANKRD30B-13:11 
LNCipedia gene ID: lnc-ANKRD30B-13
Location (hg38): chr18:14338986-14340558
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 832 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT058516
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.9815 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD30B-13:11 no no no no

Available literature

  1. Shen (2014), Long non-coding RNA profiling in laryngeal squamous cell carcinoma and its clinical significance: potential biomarkers for LSCC., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD30B-7:3
4.0 lnc-ANKRD30B-7:3
4.1 lnc-MC5R-12:11
5.0 lnc-MC5R-12:11
5.1 lnc-RIOK3-102:11
5.2 lnc-ANKRD30B-13:11